M. L. Reaka-kudla, The global biodiversity of coral reefs: A comparison with rain forests, Biodiversity II: Understanding and Protecting Our Biological Resources, pp.83-108, 1997.

R. ;. Fisher, R. A. O'leary, S. Low-choy, K. Mengersen, N. Knowlton et al., Species richness on coral reefs and the pursuit of convergent global estimates, Curr. Biol, vol.25, pp.500-505, 2015.

F. Moberg and C. Folke, Ecological goods and services of coral reef ecosystems, Ecol. Econ, vol.29, pp.215-233, 1999.

J. N. Kittinger, E. M. Finkbeiner, E. W. Glazier, and L. B. Crowder, Human dimensions of coral reef social-ecological systems, Ecol. Soc, vol.17, 2012.

J. H. Connell, Diversity in a tropical rain forests and coral reefs, Science, vol.199, pp.1302-1310, 1978.

T. J. Done, Coral zonation: Its nature and significance, In Perspectives on Coral Reefs, pp.107-147, 1983.

M. A. Huston, Patterns of species diversity on coral reefs, Annu. Rev. Ecol. Syst, vol.16, pp.149-177, 1985.

H. V. Cornell and R. H. Karlson, Species richness of reef-building corals determined by local and regional processes, J. Anim. Ecol, vol.65, pp.233-241, 1996.

J. H. Connell, T. P. Hughes, and C. C. Wallace, A 30-year study of coral abundance, recruitment, and disturbance at several scales in space and time, Ecol. Monogr, vol.67, pp.461-488, 1997.

R. H. Karlson and H. V. Cornell, Species richness of coral assemblages: Detecting regional influences at local spatial scales, Ecology, vol.83, pp.452-463, 2002.

T. F. Goreau, The ecology of Jamaican coral reefs. I. Species composition and zonation, Ecology, vol.40, pp.67-90, 1959.

R. Ninio and M. G. Meekan, Spatial patterns in benthic communities and the dynamics of a mosaic ecosystem on the Great Barrier Reef, Australia. Coral Reefs, vol.21, pp.95-103, 2002.

R. H. Karlson, H. V. Cornell, and T. P. Hughes, Coral communities are regionnally enriched along an oceanic biodiversity gradient, Nature, vol.429, pp.867-870, 2004.

D. F. Cleary, A. R. Polonia, W. Renema, B. W. Hoeksema, P. G. Rachello-dolmen et al., Variation in the composition of corals, fishes, sponges, echinoderms, ascidians, molluscs, foraminifera and macroalgae across a pronounced in-to-offshore environmental gradient in the Jakarta Bay-Thousand Islands coral reef complex, Mar. Pollut. Bull, vol.110, pp.701-717, 2016.

M. Teichberg, C. Wild, V. N. Bednarz, H. F. Kegler, M. Lukman et al., Spatio-temporal patterns in coral reef communities of the Spermonde Archipelago, 2012-2014, I: Comprehensive reef monitoring of water and benthic indicators reflect changes in reef health, Front. Mar. Sci, vol.5, p.33, 2018.

M. Adjeroud, Factors influencing spatial patterns on coral reefs around Moorea, French Polynesia, Mar. Ecol. Prog. Ser, vol.159, pp.105-119, 1997.

K. Koop, D. Booth, A. Broadbent, J. Brodie, D. Bucher et al., ENCORE: The effects of nutrient enrichment on coral reefs. Synthesis of results and conclusions, Mar. Pollut. Bull, vol.42, pp.91-120, 2001.

L. Mccook, J. Jompa, and G. Diaz-pullido, Competition between corals and algae on coral reefs: A review of evidence and mechanisms, Coral Reefs, vol.19, pp.400-417, 2001.

K. Fabricius, G. De'ath, L. Mccook, E. Turak, D. Williams et al., Changes in algal, coral and fish assemblages along water quality gradients on the inshore Great Barrier Reef, Mar. Pollut. Bull, vol.51, pp.384-398, 2005.

M. J. Caley, M. H. Carr, M. A. Hixon, T. P. Hughes, G. P. Jones et al., Recruitment and the local dynamics of open marine populations, Annu. Rev. Ecol. Syst, vol.27, pp.477-500, 1996.

M. Adjeroud, Zonation des communautés macrobenthiques le long de deux baies d'un écosystème corallien insulaire, Comptes Rendus Acad. Sci. Ser. III-Sci. Vie-Life Sci, vol.323, pp.305-313, 2000.

M. Adjeroud, J. M. Fernandez, A. G. Carroll, P. L. Harrison, and L. Penin, Spatial patterns and recruitment processes of coral assemblages among contrasting environmental conditions in the southwestern lagoon of New Caledonia, Mar. Pollut. Bull, vol.61, pp.375-386, 2010.
URL : https://hal.archives-ouvertes.fr/halsde-00580781

M. Pichon, Scleractinia of New Caledonia: Check list of reef dwelling species, Compendium of Marine Species from New Caledonia

, Doc. Sci. Tech, vol.7, pp.149-157, 2007.

J. P. Chevalier, Coral reefs of New Caledonia, In Biology and Geology of Coral Reefs, pp.143-167, 1973.

S. Andréfouët, G. Cabioch, B. Flamand, and B. Pelletier, A reappraisal of the diversity of geomorphological and genetic processes of New Caledonian coral reefs: A synthesis from optical remote sensing, coring and acoustic multibeam observations, Coral Reefs, vol.28, pp.691-707, 2009.

L. Wantiez, Les récifs coralliens de Nouvelle-Calédonie en 2006: États des lieux et réseau de suivi, Rev. Ecol. Terre Vie, vol.63, pp.117-132, 2008.

L. Wantiez, O. Château, and S. Le-mouellic, Initial and mid-term impacts of cyclone Erica on coral reef fish communities and habitat in the South Lagoon Marine Park of New Caledonia, J. Mar. Biol. Assoc, vol.86, pp.1229-1236, 2006.

N. Guillemot, P. Chabanet, and O. Le-pape, Cyclone effects on coral reef habitats in New Caledonia (South Pacific), Coral Reefs, vol.29, pp.445-453, 2010.
URL : https://hal.archives-ouvertes.fr/hal-00729472

M. Adjeroud, M. Kayal, C. Peignon, M. Juncker, S. C. Mills et al., Ephemeral and localized outbreaks of the coral predator Acanthaster cf. solaris in the southwestern lagoon of New Caledonia, Zool. Stud, vol.57, p.4, 2018.

C. Payri, F. Benzoni, L. V. André, F. Houlbrèque, and . Le-blanchissement-corallien-de, , pp.161-166, 2016.

A. Jouon, P. Douillet, S. Ouillon, and P. Fraunié, Calculations of hydrodynamic time parameters in a semi-opened coastal zone using a 3D hydrodynamic model, Cont. Shelf Res, vol.26, pp.1395-1415, 2006.
URL : https://hal.archives-ouvertes.fr/hal-00434480

S. Jacquet, B. Delesalle, J. P. Torréton, and J. Blanchot, Response of phytoplankton communities to increased anthropogenic influences (southwestern lagoon, Mar. Ecol. Prog. Ser, vol.320, pp.65-78, 2006.

X. Mari, E. Rochelle-newall, J. P. Torréton, O. Pringault, A. Jouon et al., Water residence time: A regulatory factor of the DOM to TOM transfer efficiency, Limnol. Oceanogr, vol.52, pp.808-819, 2007.

C. Migon, S. Ouillon, X. Mari, and Z. Nicolas, Geochemical and hydrodynamic constraints on the distribution of trace metal concentrations in the lagoon of Nouméa, Estuar. Coast. Shelf Sci, vol.74, pp.756-765, 2007.

A. G. Dalto, A. Grémare, A. Dinet, and D. Fichet, Muddy-bottom meiofauna responses to metal concentrations and organic enrichment in New Caledonia South-West Lagoon, Estuar. Coast. Shelf Sci, vol.67, pp.629-644, 2006.

J. M. Fernandez, S. Ouillon, C. Chevillon, P. Douillet, R. Fichez et al., A combined modelling and geochemical study of the fate of terrigenous inputs from mixed natural and mining sources in a coral reef lagoon, Mar. Pollut. Bull, vol.52, pp.320-331, 2006.
URL : https://hal.archives-ouvertes.fr/hal-00434477

P. Dumas, M. Kulbicki, S. Chifflet, R. Fichez, and J. Ferraris, Environmental factors influencing urchin spatial distributions on disturbed coral reefs, J. Exp. Mar. Biol. Ecol, vol.344, pp.88-100, 2007.
URL : https://hal.archives-ouvertes.fr/hal-01438811

L. Breau, Etude de la Bioaccumulation des Métaux dans Quelques Espèces Marines Tropicales: Recherche de Bioindicateurs de Contamination et Application à la Surveillance de L'environnement Côtier dans le Lagon, 2003.

P. L. Harrison, C. C. Wallace, and Z. Dubinsky, Reproduction, dispersal and recruitment of scleractinian corals, Coral Reef Ecosystems, vol.25, pp.133-207, 1990.

Y. Loya, Plotless and transect methods, In Coral Reefs: Research Methods

D. R. Stoddart and R. E. Johannes, , pp.197-217, 1978.

D. F. Cleary and . Suharsono,

B. W. Hoeksema, Coral diversity across a disturbance gradient in the, Pulau Seribu reef complex off Jakarta, Indonesia. Biodivers. Conserv, vol.15, pp.3653-3674, 2006.

J. Grimaud and M. Kulbicki, Influence de la distance à l'océan sur les peuplements ichtyologiques des récifs frangeants de Nouvelle-Calédonie, Comptes Rendus Acad. Sci. Ser. III-Sci. Vie-Life Sci, vol.321, pp.923-931, 1998.

M. Moustaka, M. B. Mohring, T. Holmes, R. D. Evans, D. Thomson et al., Cross-shelf heterogeneity of coral assemblages in Northwest Australia, Diversity, vol.11, 2019.

P. J. Edmunds, Patterns in the distribution of juvenile corals and coral reef community structure in, vol.202, pp.113-124, 2000.

C. S. Rogers, H. C. Fitz, M. Gilnack, J. Beets, and J. Hardin, Scleractinian recruitment patterns at Salt River Canyon, Coral Reefs, vol.3, pp.69-76, 1984.

M. G. Gleason, Coral recruitment in Moorea, French Polynesia: The importance of patch type and temporal variation, J. Exp. Mar. Biol. Ecol, vol.207, pp.79-101, 1996.

D. B. Carlon, Depth-related patterns of coral recruitment and cryptic suspention-feeding invertebrates on Guana Island, British Virgin Islands, Bull. Mar. Sci, vol.68, pp.525-541, 2001.

M. W. Miller, E. Weil, and A. M. Szmant, Coral recruitment and juvenile mortality as structuring factors for reef benthic communities in Biscayne National Park, USA, Coral Reefs, vol.19, pp.115-123, 2000.

C. N. Mundy and R. C. Babcock, Are vertical distribution patterns of scleractinian corals maintained by pre-or post-settlement processes? A case study of three contrasting species, Mar. Ecol. Prog. Ser, vol.198, pp.109-119, 2000.

L. Penin and M. Adjeroud, Relative importance of recruitment and post-settlement processes in the maintenance of coral assemblages in an insular, fragmented reef system, Mar. Ecol. Prog. Ser, vol.473, pp.149-162, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00909865

A. H. Baird, R. C. Babcock, and C. P. Mundy, Habitat selection by larvae influences the depth distribution of six common coral species, Mar. Ecol. Prog. Ser, vol.252, pp.289-293, 2003.

L. Penin, M. Adjeroud, M. S. Pratchett, and T. P. Hughes, Spatial distribution of juvenile and adult corals around Moorea (French Polynesia): Implications for population regulation, Bull. Mar. Sci, vol.80, pp.379-389, 2007.
URL : https://hal.archives-ouvertes.fr/hal-00170956

M. Pichon and J. Morrissey, Benthic zonation and community structure of South Island Reef, Lizard Island (Great Barrier Reef), Bull. Mar. Sci, vol.31, pp.581-593, 1981.

S. Jupiter, G. Roff, G. Marion, M. Henderson, V. Schrameyer et al., Linkages between coral assemblages and coral proxies of terrestrial exposure along a cross-shelf gradient on the southern Great Barrier Reef, Coral Reefs, vol.27, pp.887-903, 2008.

G. Baum, H. I. Januar, S. C. Ferse, and A. Kunzmann, Local and regional impacts of pollution on coral reefs along the Thousand Islands North of the megacity Jakarta, PLoS ONE, vol.10, 2015.

M. Kayal, J. Vercelloni, T. Lison-de-loma, P. Bosserelle, Y. Chancerelle et al., Predator Crown-of-Thorns Starfish (Acanthaster planci) outbreak, mass mortality of corals, and cascading effects on reef fish and benthic communities, PLoS ONE, vol.7, 2012.
URL : https://hal.archives-ouvertes.fr/hal-00756656

E. S. Darling, L. Alvarez-filip, T. A. Oliver, T. R. Mcclanahan, and I. M. Côté, Evaluating life-history strategies of reef corals from species traits, Ecol. Lett, vol.15, pp.1378-1386, 2012.

M. Kayal, J. Vercelloni, M. P. Wand, and M. Adjeroud, Searching for the best bet in life-strategy: A quantitative approach to individual performance and population dynamics in reef-building corals, Ecol. Complex, vol.23, pp.73-84, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01212337

S. J. Dollar and R. W. Grigg, Anthropogenic and natural stresses on selected coral reefs in Hawai'i: A multidecade synthesis of impact and recovery, Pac. Sci, vol.58, pp.281-304, 2004.

P. Dumas, H. Jimenez, C. Peignon, L. Wantiez, and M. Adjeroud, Small-scale habitat structure modulates the effects of no-take marine reserves for coral reef macroinvertebrates, PLoS ONE, vol.8, 2013.